Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCACCAGCCCTGTGTTCCCTAG&CTCCGCAGGAGCGAGGGTCGCAGAGCTGGGTGAG
((((((((.(((((..((((..&.)))).))))).))))).))).
Details
MiRNAhsa-miR-1226-3p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site643,677
Score0.846
Seed1
Au0.353
Energy-25.6
Binding len22
Me-5.962
Phylopstem0.2483103666666667
Phylopflank0.05237496249999999
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end4
Position5UTR
2D Structure