Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATAAAATGAGGGCAGTAAGAC&GTCTTCTGGAGACTGTTTCAGAAGATTTCACCTGTCTGCCCTTATTC
.....(((((((((((..((..&.))..))))))))))).
Details
MiRNAhsa-miR-3163
RefseqIDNM_033319
GeneSymbolCENPL
Binding site1352,1399
Score0.846
Seed0
Au0.544
Energy-20.2
Binding len17
Me-13.666
Phylopstem2.051612927272727
Phylopflank3.3766951275000006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure