Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCCCCATCTGTGCCCTGGGTAGGA&TTCTCCCAGAGCGCGAACCCAAACACAGATCGCCGCTGGGGTC
.((((((((.((((.(((((.((((&))))))))).))))))....................)))))).
Details
MiRNAhsa-miR-3189-5p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site156,199
Score0.846
Seed1
Au0.338
Energy-25.5
Binding len43
Me-5.771
Phylopstem0.4994723142857143
Phylopflank0.51799183875
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end7
Position5UTR
2D Structure