Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGACTGCCTTAGGAGAAAGTT&TTCTCCTCTTTCCACGCTTCTCGAGAGGCTCCCG
.((((..(((((..(((.((((.&.)))))))..))))))))).
Details
MiRNAhsa-miR-3199
RefseqIDNM_033319
GeneSymbolCENPL
Binding site19,53
Score0.846
Seed0
Au0.412
Energy-21.7
Binding len20
Me-9.384
Phylopstem0.18834128000000003
Phylopflank0.579464532368421
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure