Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTCCTCTAGGGCCTGCAGTCT&GGAGCGGAGGTCTTCCTGGGGGATT
.((((((((((((((.(..(((&)))..).))))...)))))))))).
Details
MiRNAhsa-miR-3909
RefseqIDNM_033319
GeneSymbolCENPL
Binding site727,752
Score0.846
Seed1
Au0.382
Energy-24.1
Binding len25
Me-4.026
Phylopstem0.6953156470588235
Phylopflank0.2400353024999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure