Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTTGGATTTTCCTGGGCCTCAG&CTGAGGCAGGAGAATCG
....(((((((((..(((((((&)))))))))))))))).
Details
MiRNAhsa-miR-5004-3p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site2351,2368
Score1.0
Seed0
Au0.456
Energy-23.7
Binding len17
Me-11.139
Phylopstem0.3249447351111112
Phylopflank0.2754243545
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure