Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGGACTTTTTCAGATTTGGGGAT&CCCCGCGTCTGAGGGAGCGGAG
((.(.(((((((((((.(((((..&))))).)))))))))))).)).
Details
MiRNAhsa-miR-5009-5p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site714,736
Score0.846
Seed0
Au0.353
Energy-24.4
Binding len22
Me-9.614
Phylopstem-0.04294498181818176
Phylopflank0.15563778875000012
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end5
Position5UTR
2D Structure