Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCTCAGGGATTGGATGGAGG&CCATTATGTGGCTACTACTGAATTTCTTTGGTCTGTACCCTGTAGCCCTC
.(((((((((((...((((.((((&.)))).))))...))))).)))))).
Details
MiRNAhsa-miR-5088-5p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site1539,1589
Score1.0
Seed1
Au0.588
Energy-27.6
Binding len26
Me-6.675
Phylopstem2.512197925
Phylopflank2.802517445125
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure