Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCTCCTCTACCTCATCCCAGT&TTGGGAGGCTGAGGTGGGTGGATCATTTGAGGCCAGGAA
(((((((((((((((((((((.&))))))...))))))))).))).............))).
Details
MiRNAhsa-miR-5193
RefseqIDNM_033319
GeneSymbolCENPL
Binding site2208,2247
Score0.846
Seed1
Au0.456
Energy-24.5
Binding len39
Me-3.938
Phylopstem-0.6047924488421053
Phylopflank0.0014382410999999734
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
Position3UTR
2D Structure