Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCAGATCCCAGCGGTGCCTCT&AGATCGCCGCTGGGGTCC
....(((((((((((((..(((&))).))))))))))))).
Details
MiRNAhsa-miR-5100
RefseqIDNM_033319
GeneSymbolCENPL
Binding site182,200
Score0.923
Seed0
Au0.338
Energy-27.0
Binding len18
Me-9.547
Phylopstem0.44818766923076925
Phylopflank0.5525619424999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure