Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCAGATCCCAGCGGTGCCTCT&GAGGTGCCGCCGCCATGCCTACTACGGGCGGAAATTTGAGA
((((((((((.((((((((((.&))))))))))...............))).....))))))).
Details
MiRNAhsa-miR-5100
RefseqIDNM_033319
GeneSymbolCENPL
Binding site266,307
Score0.923
Seed1
Au0.426
Energy-23.2
Binding len41
Me-6.762
Phylopstem0.7019547000000002
Phylopflank0.2901997862499999
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end7
Position5UTR
2D Structure