Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAAGTAATTGCGGGTTTTGCC&GCATCCTCAAGACCTGAAGATTACTTTA
.(((((((((.(((((((((..&.)))))))))..))))))))).
Details
MiRNAhsa-miR-548as-5p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site883,911
Score0.846
Seed1
Au0.559
Energy-19.6
Binding len22
Me-6.618
Phylopstem0.6896051111111111
Phylopflank1.4821699312500003
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure