Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGTCCCACTAATGCCAGC&GCTGGGCTTGGTGGCTCA
..(..(((((((..(((((&)))))..)))))))..).
Details
MiRNAhsa-miR-5588-3p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site2171,2189
Score0.846
Seed0
Au0.574
Energy-19.4
Binding len18
Me-14.254
Phylopstem-0.2502810285714286
Phylopflank-0.271330316
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure