Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAAAGGGTGGCAATACCTCTT&GGAGGGCCGAATTCCCTTTTC
.(((((((((((....(((((.&)))))))))....))))))).
Details
MiRNAhsa-miR-5681a
RefseqIDNM_033319
GeneSymbolCENPL
Binding site513,534
Score0.846
Seed1
Au0.456
Energy-17.8
Binding len21
Me-6.908
Phylopstem-0.17003820000000003
Phylopflank-0.15514407375
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
Position5UTR
2D Structure