Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACAGCCCAGCAGTTATCACGGG&TGATTTCAGAGCTGGGCTGG
.(((((((((.(..((((....&))))..)...))))))))).
Details
MiRNAhsa-miR-5685
RefseqIDNM_033319
GeneSymbolCENPL
Binding site543,563
Score0.846
Seed1
Au0.441
Energy-22.3
Binding len20
Me-8.764
Phylopstem-0.2371146666666667
Phylopflank-0.0826616725
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure