Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTATTGCCACCCTTTCTAGT&GCTGGGCGTGGTGGCACATGCCTA
(((((((((((((...((((((&))))))...))))))).)))))).
Details
MiRNAhsa-miR-5681b
RefseqIDNM_033319
GeneSymbolCENPL
Binding site2306,2330
Score0.923
Seed1
Au0.485
Energy-25.6
Binding len24
Me-5.763
Phylopstem0.4803486622857142
Phylopflank0.6102963915
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure