Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTATTGCCACCCTTTCTAGT&GCTGGAGAGGGACGGGTTGGGACGCACTGTCCTTTTGCCC
.((((..(((.(((((((((((&)))))))))))...)))..................)))).
Details
MiRNAhsa-miR-5681b
RefseqIDNM_033319
GeneSymbolCENPL
Binding site578,618
Score0.923
Seed0
Au0.353
Energy-20.9
Binding len40
Me-10.063
Phylopstem0.28922973636363636
Phylopflank-0.08861901374999995
Longest consecutive pairings11
Position of longest consecutive pairings29
Pairings in 3prime end8
Position5UTR
2D Structure