Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGCTATCCACTCCAGGTGTCC&GGTCTTCCTGGGGGATTTCAGTCTCCA
.((((((((((.(.(((((.(.((&)).)..))))))))))...)).)))).
Details
MiRNAhsa-miR-6500-5p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site735,762
Score0.923
Seed1
Au0.485
Energy-21.7
Binding len27
Me-7.997
Phylopstem0.4223053785714286
Phylopflank0.31152522875000005
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure