Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGGTGGTCTCTAGCCAAGG&CTCAGCTGGAGAGGGACGGGTTGGGACGCACTGTCCTTTTGCCCTTCCCCCT
.(((((.((((((((((..((.&))..))))))))..............................))..))))).
Details
MiRNAhsa-miR-6842-5p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site574,626
Score0.846
Seed0
Au0.338
Energy-22.9
Binding len52
Me-5.337
Phylopstem0.08613386499999998
Phylopflank0.01365131750000012
Longest consecutive pairings8
Position of longest consecutive pairings40
Pairings in 3prime end5
Position5UTR
2D Structure