Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGTGGAGGAAGAGGGCAGCTC&AGCGCCCTTCAACTCCGCCC
.(((((((...((((((.(((.&)))))))))...))))))).
Details
MiRNAhsa-miR-6880-5p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site201,221
Score1.0
Seed1
Au0.382
Energy-27.1
Binding len20
Me-8.917
Phylopstem0.34778714285714285
Phylopflank0.5778724375000001
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure