Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGAGCTCCAAGGACAGCCTGAAGATCTCAGTGC
(((((((((((((((((((((.&))))))))).....)))))..)))..........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033389
GeneSymbolSSH2
Binding site7643,7682
Score1.0
Seed1
Au0.426
Energy-24.3
Binding len39
Me-3.938
Phylopstem1.9877382552631575
Phylopflank2.2196219769874994
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end7
Position3UTR
2D Structure