Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCGGGAGATGGAGGAGGAGCTGGTGC
(((((((((((((((((((((.&))))))........)))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033396
GeneSymbolTNKS1BP1
Binding site223,254
Score0.846
Seed1
Au0.338
Energy-28.5
Binding len31
Me-3.938
Phylopstem0.24725189333333347
Phylopflank0.79045831375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure