Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGATGAGGTGGAGCAGGAGCGGCGGCTCAGTGA
(((((((((((((((((((...&))))))))...........)))))).......))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033449
GeneSymbolFCHSD1
Binding site1289,1327
Score0.846
Seed1
Au0.309
Energy-24.5
Binding len38
Me-3.938
Phylopstem0.17055639189189192
Phylopflank0.57313654625
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end5
PositionCDS
2D Structure