Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCTCCCAGCCCCCTTCCTACCCCTTAGCAGAGGGCCAGGTGA
(((((((.(((((((((((((.&.))))))...)).)))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033481
GeneSymbolFBXO9
Binding site4181,4224
Score0.846
Seed1
Au0.294
Energy-25.9
Binding len27
Me-6.251
Phylopstem-0.48420727058823543
Phylopflank-0.2804385075
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure