Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTGGTGCCAAGGA
.((((((((.(((.((((....&))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033486
GeneSymbolCDK11B
Binding site1889,1906
Score0.846
Seed1
Au0.368
Energy-16.6
Binding len17
Me-5.893
Phylopstem2.0239275555555554
Phylopflank1.7763666962500004
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure