Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAAGCATCAGCCGAGTGT
((((((((.(((((((((....&)))))))))....)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033502
GeneSymbolTRERF1
Binding site2632,2655
Score0.846
Seed1
Au0.368
Energy-22.7
Binding len23
Me-4.994
Phylopstem-0.7323186555555555
Phylopflank-0.16141929692499996
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end4
PositionCDS
2D Structure