Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATGGCTTTGTATGCTGGA
..(((((((((((.((......&.)).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033516
GeneSymbolTPD52L3
Binding site2330,2350
Score0.846
Seed1
Au0.574
Energy-16.7
Binding len16
Me-5.814
Phylopstem-0.13808436363636364
Phylopflank-0.05000750249999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure