Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTGAGGAAAAAAAAAAAAGTACCGCTCCAGAGCAGGAGCCTAGG
..(((((((((((((((((...&.)).)))))).))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033518
GeneSymbolSLC38A5
Binding site69,118
Score0.923
Seed1
Au0.456
Energy-24.8
Binding len22
Me-4.957
Phylopstem0.5830453950000001
Phylopflank0.40561546499999995
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end5
Position5UTR
2D Structure