Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTGGTGCCAAGGA
.((((((((.(((.((((....&))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033529
GeneSymbolCDK11A
Binding site1862,1879
Score0.846
Seed1
Au0.368
Energy-16.6
Binding len17
Me-5.893
Phylopstem1.8840183333333336
Phylopflank1.42716631875
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure