Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGCCGCAGCCCGGGAGCGGAGCAGCCGCTTCTTGAGCGGCCTGGAGCTGGTGA
(((((((((((((((((((...&.)))))))))..........................)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033550
GeneSymbolTP53RK
Binding site92,148
Score0.846
Seed1
Au0.309
Energy-26.5
Binding len47
Me-3.938
Phylopstem-0.29907052444444443
Phylopflank-0.22462368250000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure