Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTGACATTGGCCTGCCAGGC
.(((((((..((((((......&.))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033641
GeneSymbolCOL4A6
Binding site1236,1258
Score0.923
Seed1
Au0.5
Energy-20.2
Binding len18
Me-6.092
Phylopstem0.3990916428571429
Phylopflank0.3733098360000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure