Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGGCATTATCAAAGGAGTTAGTGG
((((((((((((((((((.((.&))))))))........)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033641
GeneSymbolCOL4A6
Binding site3238,3267
Score0.974
Seed1
Au0.426
Energy-26.8
Binding len29
Me-3.938
Phylopstem1.7549662461538462
Phylopflank1.9679104586250002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure