Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGGGTTTTCAAGGCTTAATCGAAGAGATGGAGCTGGTGG
(((((((((((((((((((...&))))......................))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033655
GeneSymbolCNTNAP3
Binding site266,309
Score0.846
Seed1
Au0.529
Energy-24.3
Binding len43
Me-3.938
Phylopstem0.10933673333333332
Phylopflank-0.015617817499999985
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure