Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGCAGGGAGTCGGG
..((((((((((.(.((((((.&))))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052831
GeneSymbolSLC18B1
Binding site43,62
Score0.846
Seed1
Au0.25
Energy-24.0
Binding len19
Me-6.982
Phylopstem-0.14496477000000002
Phylopflank-0.3155532489999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure