Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCTTTGACAAGGGGCCCTCCCAGTGT
((((((((((((((.((((((.&))))))...)).)))))))).....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052836
GeneSymbolCDH23
Binding site2283,2313
Score0.846
Seed1
Au0.471
Energy-23.2
Binding len30
Me-4.673
Phylopstem-0.2161635
Phylopflank-0.04764966250000001
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure