Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGTTACTACCATGCCAATGCAGCTGTGAA
(((((((((((...(((.(((&.))).)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346876
GeneSymbolEMC9
Binding site280,312
Score1.0
Seed1
Au0.471
Energy-22.1
Binding len23
Me-9.43
Phylopstem2.825197454545455
Phylopflank2.7952517300000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure