Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGAAGCCAGAAAAGACAAAGAAATATCCAGAAAGGAACAAAGTCTTGTGGACACCTTGATTTTGGTCCAGTGA
((((((((((((((((((((..&.)))))))))))))............................).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052864
GeneSymbolTIFA
Binding site2482,2558
Score0.846
Seed1
Au0.632
Energy-25.9
Binding len51
Me-3.938
Phylopstem-0.052730622448979615
Phylopflank0.2694818075
Longest consecutive pairings13
Position of longest consecutive pairings37
Pairings in 3prime end6
Position3UTR
2D Structure