Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGTCCAGCAGCTGCGGG
((((((((((((.....((((&))))....)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047421179
GeneSymbolMTHFR
Binding site5148,5170
Score1.0
Seed1
Au0.382
Energy-23.9
Binding len22
Me-7.052
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure