Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACAGTTATGGATAAGACCCGAGCTTTGATTGACTCCGTTATTCCGAAAGGGGCACAGG
..((((((((((((.((((((.&.)))))).))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052889
GeneSymbolCARD16
Binding site180,240
Score0.923
Seed1
Au0.559
Energy-22.9
Binding len22
Me-5.692
Phylopstem0.023651432307692313
Phylopflank-0.048222735
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure