Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAGAAGAGCAGCACTGTGCTGCGTGACAATTTCAGGAGTCAGG
..((((((((((((((((((..&)))))))))............................))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052898
GeneSymbolXKR4
Binding site10065,10112
Score0.846
Seed1
Au0.426
Energy-26.5
Binding len47
Me-4.957
Phylopstem-0.3408595499999999
Phylopflank-0.35571935499999996
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end6
Position3UTR
2D Structure