Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCACTCTCACATTACATGTATGCCAGGA
.((((((((((.((((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_052900
GeneSymbolCSMD3
Binding site6027,6058
Score1.0
Seed1
Au0.559
Energy-23.3
Binding len18
Me-7.14
Phylopstem4.303599999999999
Phylopflank4.40685
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure