Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTGCGTGTCAGGG
.((((((((.((..((((....&))))..)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_052902
GeneSymbolSTK11IP
Binding site3109,3127
Score0.923
Seed1
Au0.279
Energy-19.5
Binding len18
Me-7.182
Phylopstem0.600831125
Phylopflank0.7655994174999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure