Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGTCAAGGCTACAGTGAGCCATGA
((.((((((((((((((((...&)))))))))).............)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052903
GeneSymbolTUBGCP5
Binding site3423,3455
Score0.846
Seed0
Au0.456
Energy-23.5
Binding len32
Me-5.495
Phylopstem2.6340546
Phylopflank3.6567460037499995
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end5
Position3UTR
2D Structure