Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCATTCCACCACATATCCACCCTTGAGAAGTATGTCAA
...(((((((((((((((((((&)))))))))))........................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_052910
GeneSymbolSLITRK1
Binding site4949,4993
Score0.846
Seed0
Au0.647
Energy-17.8
Binding len44
Me-6.515
Phylopstem2.4560221348837215
Phylopflank2.31646198875
Longest consecutive pairings11
Position of longest consecutive pairings33
Pairings in 3prime end8
Position3UTR
2D Structure