Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTAGATAGGTCTCATTAAACAGAGTGGAGATTTCATTGGTCAGC
..(((((((((.((((((((((&)))))))))).)))............................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052910
GeneSymbolSLITRK1
Binding site4547,4596
Score0.846
Seed1
Au0.588
Energy-23.1
Binding len49
Me-8.304
Phylopstem0.9763546200000001
Phylopflank1.61861417125
Longest consecutive pairings10
Position of longest consecutive pairings39
Pairings in 3prime end8
Position3UTR
2D Structure