Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTTTGTATCAGAGAGGCAAGGTCAGTC
.((((((((((((((((((((.&)))))......))))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052910
GeneSymbolSLITRK1
Binding site367,397
Score0.846
Seed1
Au0.412
Energy-22.6
Binding len30
Me-3.793
Phylopstem0.32932786896551725
Phylopflank1.05822580375
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
Position5UTR
2D Structure