Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGAGAGGAGGACCTCATTGTTCTTAGGACCTTGGCCAGTT
.((((((((((((((((((((.&)))))))))))))).........................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052918
GeneSymbolSORCS1
Binding site6333,6379
Score0.923
Seed1
Au0.5
Energy-29.3
Binding len46
Me-3.793
Phylopstem3.5290123466666663
Phylopflank4.041136463749999
Longest consecutive pairings14
Position of longest consecutive pairings32
Pairings in 3prime end7
Position3UTR
2D Structure