Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGGAGGAAGAGCTTGCAGTGA
(((((((((((((((((((...&))))))))))..))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052928
GeneSymbolSMYD4
Binding site3171,3196
Score0.923
Seed1
Au0.368
Energy-25.4
Binding len25
Me-3.938
Phylopstem2.866568416666667
Phylopflank2.4866188463750003
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure