Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTGAGAGACTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTCCAGTGA
(((((((((((((((((((...&.)))))))))..))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_052931
GeneSymbolSLAMF6
Binding site2587,2643
Score1.0
Seed1
Au0.5
Energy-27.0
Binding len26
Me-3.938
Phylopstem-0.19302000833333333
Phylopflank0.38231012500000006
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure