Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGATGTGGTCAACGGGCTACTGCAGCACATCCTGTGCCAGGG
.(((((((((..((((......&.))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_052935
GeneSymbolNT5C3B
Binding site869,914
Score0.846
Seed1
Au0.382
Energy-19.8
Binding len17
Me-9.965
Phylopstem4.512879111111111
Phylopflank3.7871709850000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure